The First Record of A medicinal Plant Species Prosopis farcta (Banks & Sol) .J.F.Macbr (Fabaceae; Mimosoideae) from Libya
Journal Article

Prosopis farcta (Banks & Sol.) J. F. Macbr. has been reported for the first time from Libya. This species is native in Asia. Flowering specimens of Prosopis farcta collected from Sokna Region about 650 Km south-east Tripoli. It is presented with updated nomenclature, taxonomic description, geographical distribution, place of occurrence in Libya, and field colored photographs are also provided. The voucher specimens were deposited in the Herbarium of Botany Department (ULT), University of , Tripoli, Libya.

Shhoob Mohamed imhmed Elahmir, (07-2021), UNITED STATES: تم اختياره Quest Journals, 8 (6), 39-43

دراسة مدى تأثير العسل والقرفة في تحفيز عملية التجذير لبعض النباتات ومقارنتها بهرمون التجذير Toniplant الصناعي تونيبلانت
مقال في مجلة علمية

اُستخدمت في هذه الدراسة بدائل طبيعية لهرمون التجذير الصناعي التونيبلانت )Toniplant ( وهي العسل

( Honey ( والقرفة ) Cinnamon powder ل في

( لمعاملة مجموعة من النباتات المختلفة عن طريق الإكثار بال عق

التربة الرملية وتربة البيتموس من أجل تحفيز تكوين الجذور، لما لهذه البدائل من طبيعة هرمونية؛ حيث تبين أنه

باستخدام العسل ومسحوق القرفة يمكن تجذير بعض النباتات في مواسم غير مواسمها التكاثرية، حيث

8189 وذلك بحديقة كلية العلوم/ جامعة /9/ 8181 وحتى 81 /6/ استغرقت هذه التجربة ثلاثة أشهر منذ 81

غريان، وأكدت نتائج هذه الدراسة بعد تحليلها إحصائ يا باستخدام البرنامج الإحصائ ي Minitab 16.2.0 (( أ ن

البدائل )العسل والقرفة( تعمل عمل الهرمون عند زراعة ال عق

في التربة الرمل ية عند مستوى معنو ية .1010( P )<

بالإضافة إلى أن الزراعة في تربة البيتموس ذات تأثير أفضل ؛ حيث تزداد الشعيرات الجذرية وتنمو بشكل أفقي

مقارنة بالتربة الرملية مع الأخذ في الحسبان نوع النبات المزروع.

شهوب محممد أمحمد الأحمر، يوسف محمد عزو، منال خليفة حسن، وهيبة سالم الجيلاني، مبروكة الصادق كشلاف، (02-2021)، ليبيا: مجلة جامعة سبها للعلوم البحتة والتطبيقية، 1 (20)، 55-60

Plant species-dependent increased abundance and diversity of IncP-1 plasmids in the rhizosphere: New insights into their role and ecology
مقال في مجلة علمية

IncP-1 plasmids, first isolated from clinical specimens (R751, RP4), are recognized as important vectors spreading antibiotic resistance genes. The abundance of IncP-1 plasmids in the environment, previously reported, suggested a correlation with anthropogenic pollution. Unexpectedly, qPCR-based detection of IncP-1 plasmids revealed also an increased relative abundance of IncP-1 plasmids in total community DNA from the rhizosphere of lettuce and tomato plants grown in non-polluted soil along with plant age. Here we report the successful isolation of IncP-1 plasmids by exploiting their ability to mobilize plasmid pSM1890. IncP-1 plasmids were captured from the rhizosphere but not from bulk soil, and a high diversity was revealed by sequencing 14 different plasmids that were assigned to IncP-1β, δ, and ε subgroups. Although backbone genes were highly conserved and mobile elements or remnants as Tn501, IS1071, Tn402, or class 1 integron were carried by 13 of the sequenced IncP-1 plasmids, no antibiotic resistance genes were found. Instead, seven plasmids had a mer operon with Tn501-like transposon and five plasmids contained putative metabolic gene clusters linked to these mobile elements. In-depth sequence comparisons with previously known plasmids indicate that the IncP-1 plasmids captured from the rhizosphere are archetypes of those found in clinical isolates. Our findings that IncP-1 plasmids do not always carry accessory genes in unpolluted rhizospheres are important to understand the ecology and role of the IncP-1 plasmids in the natural environment.

Khald Blau، (11-2020)، UK: Frontiers in Microbiology، 11 (1)، 1-11

Detection, Isolation, and Characterization of Plasmids in the Environment
Chapter

Plasmids play a major role in the bacterial adaptation to changing and stressful environmental conditions caused by antibiotics, heavy metals, and disinfectants. However, the investigation of the ecology and diversity of environmental plasmids is challenging due to their typically low abundance in soil bacterial communities and the low cultivability of their hosts. Here we discuss the potentials and limitations of cultivation-dependent and cultivation-independent approaches for detecting and quantifying plasmids in total community DNA from environmental samples. Protocols for PCR-based detection of plasmid-specific sequences in total community DNA are presented. Furthermore, protocols to obtain and characterize plasmids either from isolates (endogenous plasmid isolation) or by capturing into a recipient strain by biparental and triparental mating will be provided.

Khald Blau, (10-2020), USA: Methods in Molecular Biology, 39-60

Colistin-resistant Enterobacteriaceae isolated from process waters and wastewater from German poultry and pig slaugtherhouses
Journal Article

Due to the high prevalence of colistin-resistant Enterobacteriaceae in poultry and pigs, process waters and wastewater from slaughterhouses were considered as a hotspot for isolates carrying plasmid-encoded, mobilizable colistin resistances (mcr genes). Thus, questions on the effectiveness of wastewater treatment in in-house and municipal wastewater treatment plants (WWTPs) as well as on the diversity of the prevailing isolates, plasmid types, and their transmissibility arise. Process waters and wastewater accruing in the delivery and unclean areas of two poultry and two pig slaughterhouses were screened for the presence of target colistin-resistant bacteria (i.e., Escherichia coli, Klebsiella spp., Enterobacter cloacae complex). In-house and municipal WWTPs (mWWTPs) including receiving waterbodies were investigated as well. Samples taken in the poultry slaughterhouses yielded the highest occurrence of target colistin-resistant Enterobacteriaceae (40.2%, 33/82), followed by mWWTPs (25.0%, 9/36) and pig slaughterhouses (14.9%, 10/67). Recovered isolates exhibited various resistance patterns. The resistance rates using epidemiological cut-off values were higher in comparison to those obtained with clinical breakpoints. Noteworthy, MCR-1-producing Klebsiella pneumoniae and E. coli were detected in scalding waters and preflooders of mWWTPs. A total of 70.8% (46/65) of E. coli and 20.6% (7/34) of K. pneumoniae isolates carried mcr-1 on a variety of transferable plasmids with incompatibility groups IncI1, IncHI2, IncX4, IncF, and IncI2 ranging between 30 and 360 kb. The analyzed isolates carrying mcr-1 on transferable plasmids (n = 53) exhibited a broad diversity, as they were assigned to 25 different XbaI profiles. Interestingly, in the majority of colistin-resistant mcr-negative E. coli and K. pneumoniae isolates non-synonymous polymorphisms in pmrAB were detected. Our findings demonstrated high occurrence of colistin-resistant E. coli and K. pneumoniae carrying mcr-1 on transferrable plasmids in poultry and pig slaughterhouses and indicate their dissemination into surface water.

Khald Blau, (10-2020), UK: Frontiers in Microbiology, 11 (2699), 1-18

Floristic Study of Sedrores Mountains in Gharyan District–Libya
Journal Article

A floristic survey of Sedrores Al-Qawasim mountains in Gharyan district - Libya was conducted in two consecutive growing seasons from 01/04/2018 to 01/6/2019. In this study area, a total number of 320 plant species belonging to 214 genera were collected representing 44 families, of which 39 families and 276 species belonging to dicotyledons, and 5 families and 44 species are belonging to monocotyledons. The results showed the dominance of the family Asteraceae with 60 species, followed by the family Fabaceae with 32 species, then the family Poaceae with 29 species. The results showed the dominance of the (Euphorbia genus) with 7 species, followed by Helianthenum, Plantago and Erodium with 6 species each. Moreover, life-form spectrum analysis showed the predominance of therophytes with 210, followed by Hemicryptophytes with 59 species, while chorotype spectrum analysis showed the dominance of Mediterranian species with 151 species, followed by Mediterrean/Iranu-Turanean with 72 species. 

Shhoob Mohamed imhmed Elahmir, Mohammed H. Mahklouf, Mahmood B. Shanta, Hisham Ali Abo -Jaafer, (07-2020), كندا: J. of Advanced Botany and Zoology, 1 (8), 1-10

تأثير مادة النشا في إطالة فترة تخزين بعض الفواكه والخضروات في درجة حرارة الغرفة
مقال في مؤتمر علمي

مستخلص البحث:

تحضى تقنية المواد المستخدمة كأغلفة مستساغة لتغليف ثمار الفواكه والخضروات

لغرض حفظها وإطالة فترة تخزينها بإهتمام واسع هذه الأيام في كثير من الدول،لما لها من نتائج إيجابية للمحافظة على الثمار بعد الحصاد؛ وذلك للمساهمة في زيادة إنتاج الغذاء وتحقيق الأمن الغذائي. اُستخدمت في هذه الدراسة مادة النشا لهذا الغرض عن طريق غمر بعض ثمار الفواكه (البرتقال، الموز، التفاح، الكمثرى والخوخ) وكذلك بعض ثمار الخضروات (الخيار، الطماطم، الفلفل، القرع والجزر) في محلول النشا في المعمل لفترة 15 دقيقة ثم تركت الثمار في حوافظ خاصة بها تهوية، ولوحظت التغيرات التي طرأت عليها. أوضحت هذه الدراسة أن جميع أصناف ثمار الفواكه المعاملة بمادة النشا عدا التفاح كانت أكثر مقاومة للأمراض الفطرية والفساد الذي طرأ عليها، مقارنة بالثمار الغير معاملة (الشاهد).بينما أبدت جميع ثمار الخضروات المعاملة مقاومة أكثر للأمراض الفطرية والفساد من الثمار الغير معاملة.

شهوب محممد أمحمد الأحمر، يوسف عزو، مصطفى كركوري، (06-2020)، ليبيا: جامعة غريان، 106-114

Whole genome sequencing of Escherichia coli from store bought produce
Journal Article

The role of agriculture in the transfer of drug resistant pathogens to humans is widely debated and poorly understood. Escherichia coli is a valuable indicator organism for contamination and carriage of antimicrobial resistance (AMR) in foods. Whilst whole genome sequences for E. coli from animals and associated meats are common, sequences from produce are scarce. Produce may acquire drug resistant E. coli from animal manure fertilizers, contaminated irrigation water and wildlife, particularly birds. Whole genome sequencing was used to characterize 120 tetracycline (TET) resistant E. coli from store-bought, ready-to-eat cilantro, arugula and mixed salad from two German cities. E. coli were recovered on the day of purchase and after 7 days of refrigeration. Cilantro was far more frequently contaminated with TET-resistant E. coli providing 102 (85%) sequenced strains. Phylogroup B1 dominated the collection (n = 84, 70%) with multi-locus sequence types B1-ST6186 (n = 37, 31%), C-ST165 (n = 17, 14%), B1-ST58 (n = 14, 12%), B1-ST641 (n = 8, 7%), and C-ST88 (n = 5, 4%) frequently identified. Notably, seven strains of diverse sequence type (ST) carried genetic indicators of ColV virulence plasmid carriage. A number of previously identified and novel integrons associated with insertion elements including IS26 were also identified. Storage may affect the lineages of E. coli isolated, however further studies are needed. Our study indicates produce predominantly carry E. coli with a commensal phylogroup and a variety of AMR and virulence-associated traits. Genomic surveillance of bacteria that contaminate produce should be a matter of public health importance in order to develop a holistic understanding of the environmental dimensions of AMR.

Khald Blau, (01-2020), UK: Frontiers in Microbiology, 110 (1), 1-11

تحديد اصناف الزيتون المنتشرة بمنطقة الاصابعة ومحاولة تحديد زمن الجني الامثل
مقال في مجلة علمية

استهدفت هذه الدراسة تقدير محتوى ثمار الزبتون من الزيت خلال اشهر موسم الجني

شهوب محممد أمحمد الأحمر، خليفة زنين، عمر سعيد، (06-2019)، ليبيا: جامعة غريان، 17 (1)، 155-164

The first record of Abutilon theophrasti (Malvaceae) in the flora of Libya
Journal Article

A new record for Abutilon theophrasti is recorded for the first time in the flora of Libya. This widespread agricultural weed was collected from El-Hamra region (El-Qabel) in the Nafusa Mountain south of Tripoli. To facilitate further identification and future detection, a full description, habitat information, distribution map and distribution data are provided. A brief discussion about the most important threats posed by this species is presented.

Shhoob Mohamed imhmed Elahmir, MOHAMMED. H. MAHKLOUF, (05-2019), ابريطانيا: Phytotaxa, 402 (5), 259-254

© All rights reserved to University of Gharyan